{"id":90,"date":"2015-03-11T19:09:25","date_gmt":"2015-03-11T19:09:25","guid":{"rendered":"http:\/\/reu.engr.uga.edu\/?p=90"},"modified":"2015-07-24T19:39:16","modified_gmt":"2015-07-24T19:39:16","slug":"development-of-a-laser-gate-for-protein-transport-analysis-at-the-ciliary-tip","status":"publish","type":"post","link":"https:\/\/reu.engr.uga.edu\/?p=90","title":{"rendered":"laser gate for protein transport analysis at the ciliary tip"},"content":{"rendered":"<p>Abstract:<\/p>\n<p class=\"p1\">Cilia and flagella are cellular extensions that function in motility and sensing.\u00a0 Human sperm cells use cilia for locomotion and the multiple cilia of epithelial cells in the airways move foreign particles outward.\u00a0 Non-motile cilia in the eyes and nose function in the perception of light and chemical signals.\u00a0 Because cilia lack ribosomes, the RNA-protein particles responsible for protein synthesis, all proteins needed for cilia function or growth must be transported from the cell body into the protruding organelle.\u00a0 Intraflagellar transport (IFT) is one pathway for proteins transport from the base of the cilia, to the tip, and back again.\u00a0 Important steps of cilia assembly are thought to happen at the ciliary tip; cilia grow by the addition of subunits at the tip and IFT complexes are remodeled at the tip to allow their return to the cell body.\u00a0 The goal of my work is to develop an improved technique to image individual protein particles at the ciliary tip.\u00a0 Proteins of the IFT particles are made visible under the microscope via florescent protein (i.e. GFP) tagging.\u00a0 However, crowding of the particles at the ciliary tip largely obscures the visibility of individual proteins.\u00a0 A focused laser beam is used to bleach the fluorescence of some IFT particles at the tip. This increases the clarity for the remaining particles, but the tip is quickly refilled with florescent particles.\u00a0 We used a laser gate to control the bleaching laser; the laser blinks on and off at the base of the cilium in a pattern that will bleach most IFT particles but allows a few particles to pass unbleached through the gate, enter the cilium, and be imaged as individual particles while they complete their journey through the cilium.\u00a0 Further, we controlled the camera to not record while the bleaching laser is on; this will facilitate data analysis as it avoids recording of overexposed frames.\u00a0 This concept is carried out using a program written in Micro Manager and is communicated through an Arduino to the laser shutter.\u00a0 This program controls the laser shutter and the camera to capture movies of single IFT particles and their cargoes inside the cilia.<\/p>\n<p class=\"p1\">Fellow:<\/p>\n<p class=\"p1\">Heather Bomberger, Virginia Tech<\/p>\n<p class=\"p1\"><a href=\"https:\/\/reu.engr.uga.edu\/wp-content\/uploads\/2015\/03\/heather_research_image-e1426100951369.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-full wp-image-94\" src=\"https:\/\/reu.engr.uga.edu\/wp-content\/uploads\/2015\/03\/heather_research_image-e1426100951369.jpg\" alt=\"heather_research_image\" width=\"747\" height=\"317\" \/><\/a><\/p>\n<p class=\"p1\">Poster:<\/p>\n<p class=\"p1\"><a href=\"https:\/\/reu.engr.uga.edu\/wp-content\/uploads\/2015\/03\/Bomberger_Poster.pdf\">Bomberger_Poster<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Abstract: Cilia and flagella are cellular extensions that function in motility and sensing.\u00a0 Human sperm cells use cilia for locomotion and the multiple cilia of&#8230;<\/p>\n","protected":false},"author":2,"featured_media":91,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[73,53,83,82,7],"tags":[4,10,8,33,9],"class_list":["post-90","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-2014-program","category-2014-projects","category-highlights","category-participants","category-research-projects","tag-cell","tag-ciliary-tip","tag-laser","tag-microscopy","tag-protein-transport"],"_links":{"self":[{"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/posts\/90","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=90"}],"version-history":[{"count":3,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/posts\/90\/revisions"}],"predecessor-version":[{"id":370,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/posts\/90\/revisions\/370"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=\/wp\/v2\/media\/91"}],"wp:attachment":[{"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=90"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=90"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/reu.engr.uga.edu\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=90"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}